Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC022497.1-201ENST00000624916 3691 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC104457.1-201ENST00000401024 814 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AL136309.1-201ENST00000403917 691 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 EIF4HP1-201ENST00000453115 687 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 HIST2H2BC-201ENST00000498492 580 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 NDUFV2P1-201ENST00000596415 907 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC004466.1-201ENST00000599515 1080 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 AC138649.2-201ENST00000615886 705 ntBASIC9.54□□□□□ -0.88
SCXQ7RTU7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC9.54□□□□□ -0.88
SCXQ7RTU7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 AC126365.1-201ENST00000578585 1514 ntBASIC9.53□□□□□ -0.88
SCXQ7RTU7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC9.53□□□□□ -0.88
SCXQ7RTU7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SCXQ7RTU7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms