Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 USP17L6P-201ENST00000382470 1197 ntBASIC16.7■□□□□ 0.26
TOP1P11387 AL627231.1-201ENST00000394467 1125 ntBASIC16.7■□□□□ 0.26
TOP1P11387 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 ALG1L13P-202ENST00000519320 584 ntBASIC16.7■□□□□ 0.26
TOP1P11387 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.7■□□□□ 0.26
TOP1P11387 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 SIGLEC18P-201ENST00000602271 909 ntBASIC16.7■□□□□ 0.26
TOP1P11387 AC084346.2-201ENST00000607097 949 ntBASIC16.7■□□□□ 0.26
TOP1P11387 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.7■□□□□ 0.26
TOP1P11387 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.7■□□□□ 0.26
TOP1P11387 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TOP1P11387 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.7■□□□□ 0.26
TOP1P11387 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 AC091046.1-201ENST00000331871 207 ntBASIC16.69■□□□□ 0.26
TOP1P11387 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 KRT18P15-201ENST00000458108 1291 ntBASIC16.69■□□□□ 0.26
TOP1P11387 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 PRKXP1-201ENST00000561423 1122 ntBASIC16.69■□□□□ 0.26
TOP1P11387 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.69■□□□□ 0.26
TOP1P11387 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
TOP1P11387 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.69■□□□□ 0.26
TOP1P11387 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.69■□□□□ 0.26
TOP1P11387 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TOP1P11387 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 MARK2P16-201ENST00000605714 1723 ntBASIC16.68■□□□□ 0.26
TOP1P11387 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TOP1P11387 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
TOP1P11387 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TOP1P11387 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms