Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 BX537318.2-201ENST00000624893 4162 ntBASIC11.28□□□□□ -0.6
IFNA1P01562 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
IFNA1P01562 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.28□□□□□ -0.6
IFNA1P01562 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.28□□□□□ -0.6
IFNA1P01562 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
IFNA1P01562 AC102953.2-201ENST00000609755 3026 ntBASIC11.27□□□□□ -0.6
IFNA1P01562 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.27□□□□□ -0.6
IFNA1P01562 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
IFNA1P01562 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
IFNA1P01562 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.27□□□□□ -0.6
IFNA1P01562 AC022364.1-202ENST00000617468 2409 ntBASIC11.27□□□□□ -0.6
IFNA1P01562 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
IFNA1P01562 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
IFNA1P01562 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
IFNA1P01562 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
IFNA1P01562 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 AL139094.1-201ENST00000405549 1188 ntBASIC11.27□□□□□ -0.61
IFNA1P01562 KRT18P2-201ENST00000447938 1258 ntBASIC11.27□□□□□ -0.61
IFNA1P01562 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
IFNA1P01562 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
IFNA1P01562 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.27□□□□□ -0.61
IFNA1P01562 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
IFNA1P01562 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.27□□□□□ -0.61
IFNA1P01562 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
IFNA1P01562 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
IFNA1P01562 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 AC108024.1-201ENST00000626286 1721 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 PCDHA4-204ENST00000618834 10557 ntBASIC11.26□□□□□ -0.61
IFNA1P01562 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
IFNA1P01562 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
IFNA1P01562 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
IFNA1P01562 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
IFNA1P01562 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms