Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 CTBP2P5-201ENST00000454986 1264 ntBASIC11.43□□□□□ -0.58
UPK2O00526 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.43□□□□□ -0.58
UPK2O00526 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.43□□□□□ -0.58
UPK2O00526 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 TPO-206ENST00000382269 1155 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.42□□□□□ -0.58
UPK2O00526 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.42□□□□□ -0.58
UPK2O00526 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 AC106886.1-201ENST00000568660 600 ntBASIC11.42□□□□□ -0.58
UPK2O00526 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UPK2O00526 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.42□□□□□ -0.58
UPK2O00526 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UPK2O00526 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms