Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HSPA7-201ENST00000445535 1927 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC005840.4-201ENST00000541242 2494 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AGAP10P-201ENST00000454844 2418 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AL928921.2-201ENST00000641325 2442 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 AC015802.1-201ENST00000588104 1449 ntBASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 AC064801.2-201ENST00000625052 1303 ntBASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 AC090505.1-201ENST00000430515 1834 ntBASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 PYY2-201ENST00000315776 282 ntBASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KRTAP4-3Q9BYR4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms