Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 AC140912.1-201ENST00000577171 1054 ntBASIC12.27□□□□□ -0.45
NICN1Q9BSH3 GNRHR2-203ENST00000581100 1187 ntBASIC12.27□□□□□ -0.45
NICN1Q9BSH3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NICN1Q9BSH3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ACTG1P3-201ENST00000431775 1114 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 FAM8A4P-201ENST00000435433 1213 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 CYMP-203ENST00000474680 1263 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 KRT18P8-201ENST00000581937 1246 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 AC027601.3-201ENST00000622907 509 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 AC004623.1-201ENST00000624592 2127 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 BEND3P3-201ENST00000611030 2440 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
NICN1Q9BSH3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.25□□□□□ -0.45
NICN1Q9BSH3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms