Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 AL133499.1-201ENST00000596207 608 ntBASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 SIGLEC18P-201ENST00000602271 909 ntBASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 AC103810.10-201ENST00000606504 343 ntBASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 LINC00115-201ENST00000473798 1317 ntBASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 CAP2P1-201ENST00000557743 1390 ntBASIC11.03□□□□□ -0.64
UBE2E2Q96LR5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 AC139749.1-202ENST00000617529 3139 ntBASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UBE2E2Q96LR5 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 OR8T1P-201ENST00000421347 918 ntBASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 RNA5SP423-201ENST00000517127 109 ntBASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 AC009560.1-201ENST00000620208 434 ntBASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 TEKT4P2-202ENST00000559466 1312 ntBASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.02□□□□□ -0.65
UBE2E2Q96LR5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2E2Q96LR5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms