Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 TRMT112P3-201ENST00000580149 358 ntBASIC21.75■■□□□ 1.07
VPS8Q8N3P4 AL136982.5-201ENST00000605222 294 ntBASIC21.75■■□□□ 1.07
VPS8Q8N3P4 AC026120.2-201ENST00000617239 309 ntBASIC21.75■■□□□ 1.07
VPS8Q8N3P4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS8Q8N3P4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 MIR5196-201ENST00000578146 115 ntBASIC21.74■■□□□ 1.07
VPS8Q8N3P4 AL132780.4-201ENST00000624870 1135 ntBASIC21.74■■□□□ 1.07
VPS8Q8N3P4 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VPS8Q8N3P4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AC026410.1-201ENST00000507366 1101 ntBASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AC100858.1-201ENST00000514059 1228 ntBASIC21.73■■□□□ 1.07
VPS8Q8N3P4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC21.73■■□□□ 1.07
VPS8Q8N3P4 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AC073869.1-201ENST00000415574 2762 ntBASIC21.73■■□□□ 1.07
VPS8Q8N3P4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC21.73■■□□□ 1.07
VPS8Q8N3P4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 PIN4P1-201ENST00000451079 396 ntBASIC21.72■■□□□ 1.07
VPS8Q8N3P4 GULOP-201ENST00000454030 748 ntBASIC21.72■■□□□ 1.07
VPS8Q8N3P4 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS8Q8N3P4 CR383656.2-201ENST00000548656 2254 ntBASIC21.72■■□□□ 1.07
VPS8Q8N3P4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms