Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 MSTO2P-201ENST00000314835 1709 ntBASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TMEM53Q6P2H8 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 TPM3P8-201ENST00000330554 643 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC245100.3-201ENST00000441281 285 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 GAPDHP21-201ENST00000450301 1010 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC026434.2-201ENST00000506094 1078 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 USP32P1-208ENST00000506594 1164 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC106760.1-201ENST00000508690 800 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 RN7SL48P-201ENST00000579283 293 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AC018665.1-201ENST00000622927 1362 ntBASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TMEM53Q6P2H8 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.17□□□□□ -0.3
TMEM53Q6P2H8 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms