Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 KRT8P19-201ENST00000551916 1455 ntBASIC15.49■□□□□ 0.07
NCKAP1LP55160 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 MIR3907-201ENST00000579424 151 ntBASIC15.49■□□□□ 0.07
NCKAP1LP55160 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 CR392039.2-201ENST00000623182 509 ntBASIC15.49■□□□□ 0.07
NCKAP1LP55160 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 KRT8P18-201ENST00000413425 1445 ntBASIC15.49■□□□□ 0.07
NCKAP1LP55160 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NCKAP1LP55160 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NCKAP1LP55160 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC004554.1-201ENST00000422830 1468 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC098934.1-203ENST00000442868 1262 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 IGLV3-15-201ENST00000518356 244 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC084346.2-201ENST00000607097 949 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 AC072061.1-201ENST00000569710 2234 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NCKAP1LP55160 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NCKAP1LP55160 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 OR2I1P-209ENST00000641730 5365 ntBASIC15.48■□□□□ 0.07
NCKAP1LP55160 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NCKAP1LP55160 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.47■□□□□ 0.07
NCKAP1LP55160 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms