Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GRIA4P48058 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GRIA4P48058 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GRIA4P48058 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.62□□□□□ -0.07
GRIA4P48058 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.62□□□□□ -0.07
GRIA4P48058 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.62□□□□□ -0.07
GRIA4P48058 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.62□□□□□ -0.07
GRIA4P48058 AC092978.1-202ENST00000637590 1327 ntBASIC14.62□□□□□ -0.07
GRIA4P48058 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.62□□□□□ -0.07
GRIA4P48058 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GRIA4P48058 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.62□□□□□ -0.07
GRIA4P48058 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
GRIA4P48058 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.61□□□□□ -0.07
GRIA4P48058 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.61□□□□□ -0.07
GRIA4P48058 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GRIA4P48058 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
GRIA4P48058 KRT8P21-201ENST00000430398 1491 ntBASIC14.61□□□□□ -0.07
GRIA4P48058 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GRIA4P48058 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 CICP17-201ENST00000418553 2377 ntBASIC14.61□□□□□ -0.07
GRIA4P48058 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GRIA4P48058 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
GRIA4P48058 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 TBC1D3J-201ENST00000620719 1426 ntBASIC14.6□□□□□ -0.07
GRIA4P48058 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.6□□□□□ -0.07
GRIA4P48058 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
GRIA4P48058 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.6□□□□□ -0.07
GRIA4P48058 RN7SL258P-201ENST00000478664 300 ntBASIC14.6□□□□□ -0.07
GRIA4P48058 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 IQSEC3P1-201ENST00000538799 536 ntBASIC14.6□□□□□ -0.07
GRIA4P48058 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.6□□□□□ -0.07
GRIA4P48058 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.6□□□□□ -0.07
GRIA4P48058 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
GRIA4P48058 COX6A1P2-201ENST00000620597 330 ntBASIC14.6□□□□□ -0.07
GRIA4P48058 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.6□□□□□ -0.07
GRIA4P48058 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GRIA4P48058 AHCYP4-201ENST00000419201 1315 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms