Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TGFB1I1O43294 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 AL591122.2-201ENST00000624125 1853 ntBASIC15.42■□□□□ 0.06
TGFB1I1O43294 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TGFB1I1O43294 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 OR2K2-202ENST00000374428 1038 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SNORA50C-201ENST00000408535 133 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 RN7SL258P-201ENST00000478664 300 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 SLC25A15P3-201ENST00000505530 290 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 AC020922.3-201ENST00000595064 547 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 AL133467.4-201ENST00000602953 725 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SNORA50.1-201ENST00000628590 135 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 AL133338.1-201ENST00000565695 1517 ntBASIC15.41■□□□□ 0.06
TGFB1I1O43294 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TGFB1I1O43294 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.41■□□□□ 0.06
TGFB1I1O43294 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 ABCD1P2-201ENST00000429313 1601 ntBASIC15.4■□□□□ 0.06
TGFB1I1O43294 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AC026320.2-201ENST00000434379 478 ntBASIC15.4■□□□□ 0.06
TGFB1I1O43294 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AC242376.1-201ENST00000559033 726 ntBASIC15.4■□□□□ 0.06
TGFB1I1O43294 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AL139099.5-201ENST00000635274 300 ntBASIC15.4■□□□□ 0.06
TGFB1I1O43294 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TGFB1I1O43294 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms