Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.89■□□□□ 0.29
SLF2Q8IX21 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF2Q8IX21 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLF2Q8IX21 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF2Q8IX21 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SLF2Q8IX21 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLF2Q8IX21 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.89■□□□□ 0.29
SLF2Q8IX21 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 BCAS2P2-201ENST00000425064 674 ntBASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC012497.1-201ENST00000429392 575 ntBASIC16.88■□□□□ 0.29
SLF2Q8IX21 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 IGHV1-12-201ENST00000518307 205 ntBASIC16.88■□□□□ 0.29
SLF2Q8IX21 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 AL009176.1-201ENST00000607876 650 ntBASIC16.88■□□□□ 0.29
SLF2Q8IX21 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF2Q8IX21 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF2Q8IX21 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 OR52M2P-201ENST00000414298 959 ntBASIC16.87■□□□□ 0.29
SLF2Q8IX21 AL355334.1-201ENST00000417713 215 ntBASIC16.87■□□□□ 0.29
SLF2Q8IX21 AC097065.1-201ENST00000425737 517 ntBASIC16.87■□□□□ 0.29
SLF2Q8IX21 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 AC114501.1-201ENST00000445949 172 ntBASIC16.87■□□□□ 0.29
SLF2Q8IX21 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 RN7SKP155-201ENST00000516031 288 ntBASIC16.87■□□□□ 0.29
SLF2Q8IX21 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLF2Q8IX21 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLF2Q8IX21 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF2Q8IX21 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF2Q8IX21 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF2Q8IX21 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLF2Q8IX21 AC068760.1-201ENST00000493579 1953 ntBASIC16.86■□□□□ 0.29
SLF2Q8IX21 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms