Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC27Q2M243 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC27Q2M243 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC27Q2M243 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.39■□□□□ 0.53
CCDC27Q2M243 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC27Q2M243 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC27Q2M243 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC27Q2M243 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC27Q2M243 MAPT-IT1-201ENST00000624111 3016 ntBASIC18.39■□□□□ 0.53
CCDC27Q2M243 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC27Q2M243 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC27Q2M243 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 IGHJ2P-201ENST00000454480 60 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 RN7SL788P-201ENST00000460504 316 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 AC245884.6-201ENST00000515672 1067 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 AC009145.4-201ENST00000625119 1294 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 TBC1D27-202ENST00000424239 1573 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC27Q2M243 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 AL359845.1-201ENST00000458202 1648 ntBASIC18.38■□□□□ 0.53
CCDC27Q2M243 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC27Q2M243 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 AL583805.1-201ENST00000391389 531 ntBASIC18.37■□□□□ 0.53
CCDC27Q2M243 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 AL807761.2-201ENST00000422849 729 ntBASIC18.37■□□□□ 0.53
CCDC27Q2M243 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 RN7SL720P-201ENST00000488178 304 ntBASIC18.37■□□□□ 0.53
CCDC27Q2M243 AC095040.1-201ENST00000513286 675 ntBASIC18.37■□□□□ 0.53
CCDC27Q2M243 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC27Q2M243 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC27Q2M243 AC010327.5-201ENST00000586923 3061 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 MIR600HG-201ENST00000449175 5984 ntBASIC18.36■□□□□ 0.53
CCDC27Q2M243 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC27Q2M243 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC27Q2M243 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms