Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CAV3P56539 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.8□□□□□ -0.36
CAV3P56539 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CAV3P56539 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CAV3P56539 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 DGCR5-201ENST00000399539 862 ntBASIC12.79□□□□□ -0.36
CAV3P56539 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
CAV3P56539 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 AC103988.2-201ENST00000561804 725 ntBASIC12.79□□□□□ -0.36
CAV3P56539 AL359711.2-201ENST00000563105 872 ntBASIC12.79□□□□□ -0.36
CAV3P56539 WASH4P-201ENST00000564273 1246 ntBASIC12.79□□□□□ -0.36
CAV3P56539 CTBP2P3-201ENST00000585629 1255 ntBASIC12.79□□□□□ -0.36
CAV3P56539 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.79□□□□□ -0.36
CAV3P56539 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
CAV3P56539 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 MARK2P9-201ENST00000430958 1727 ntBASIC12.79□□□□□ -0.36
CAV3P56539 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
CAV3P56539 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CAV3P56539 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CAV3P56539 MKRN5P-201ENST00000445263 1467 ntBASIC12.78□□□□□ -0.36
CAV3P56539 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CAV3P56539 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CAV3P56539 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CAV3P56539 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.78□□□□□ -0.36
CAV3P56539 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.78□□□□□ -0.36
CAV3P56539 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CAV3P56539 AL139094.1-201ENST00000405549 1188 ntBASIC12.78□□□□□ -0.36
CAV3P56539 TLE1P1-201ENST00000422965 589 ntBASIC12.78□□□□□ -0.36
CAV3P56539 AC136604.1-202ENST00000425471 771 ntBASIC12.78□□□□□ -0.36
CAV3P56539 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms