Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDH8P55286 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.17■□□□□ 0.02
CDH8P55286 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 AL590824.1-201ENST00000403828 1349 ntBASIC15.17■□□□□ 0.02
CDH8P55286 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDH8P55286 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CDH8P55286 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 RPL13AP3-202ENST00000494676 1473 ntBASIC15.16■□□□□ 0.02
CDH8P55286 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH8P55286 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 AL583805.1-201ENST00000391389 531 ntBASIC15.16■□□□□ 0.02
CDH8P55286 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH8P55286 AC007274.2-201ENST00000421675 662 ntBASIC15.16■□□□□ 0.02
CDH8P55286 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH8P55286 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH8P55286 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 AC105129.2-201ENST00000559536 390 ntBASIC15.16■□□□□ 0.02
CDH8P55286 MIR3677-201ENST00000578964 60 ntBASIC15.16■□□□□ 0.02
CDH8P55286 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH8P55286 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH8P55286 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH8P55286 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH8P55286 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.16■□□□□ 0.02
CDH8P55286 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH8P55286 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH8P55286 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 KRT8P31-201ENST00000504812 1408 ntBASIC15.16■□□□□ 0.02
CDH8P55286 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH8P55286 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH8P55286 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH8P55286 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH8P55286 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 AL365209.1-201ENST00000624418 6473 ntBASIC15.15■□□□□ 0.02
CDH8P55286 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 FAM90A2P-201ENST00000511144 1395 ntBASIC15.15■□□□□ 0.02
CDH8P55286 FAM90A25P-201ENST00000528404 1395 ntBASIC15.15■□□□□ 0.02
CDH8P55286 AC068760.1-201ENST00000493579 1953 ntBASIC15.15■□□□□ 0.02
CDH8P55286 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDH8P55286 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDH8P55286 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 CEP164P1-201ENST00000455142 418 ntBASIC15.15■□□□□ 0.02
CDH8P55286 UPF3AP2-201ENST00000457924 1132 ntBASIC15.15■□□□□ 0.02
CDH8P55286 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 IGLV3-15-201ENST00000518356 244 ntBASIC15.15■□□□□ 0.02
CDH8P55286 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CDH8P55286 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH8P55286 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH8P55286 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CDH8P55286 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms