Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL022313.4-201ENST00000562756 2046 ntBASIC16.75■□□□□ 0.27
TOP1P11387 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TOP1P11387 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 KRT17P5-201ENST00000332088 839 ntBASIC16.75■□□□□ 0.27
TOP1P11387 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.75■□□□□ 0.27
TOP1P11387 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
TOP1P11387 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.75■□□□□ 0.27
TOP1P11387 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 IGLV3-15-201ENST00000518356 244 ntBASIC16.75■□□□□ 0.27
TOP1P11387 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TOP1P11387 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.75■□□□□ 0.27
TOP1P11387 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 MIR3677-201ENST00000578964 60 ntBASIC16.75■□□□□ 0.27
TOP1P11387 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.75■□□□□ 0.27
TOP1P11387 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
TOP1P11387 KRT8P31-201ENST00000504812 1408 ntBASIC16.75■□□□□ 0.27
TOP1P11387 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TOP1P11387 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.75■□□□□ 0.27
TOP1P11387 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TOP1P11387 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP1P11387 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TOP1P11387 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 LINC01815-202ENST00000641468 1409 ntBASIC16.74■□□□□ 0.27
TOP1P11387 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP1P11387 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.74■□□□□ 0.27
TOP1P11387 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 AC114947.1-202ENST00000514136 344 ntBASIC16.74■□□□□ 0.27
TOP1P11387 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.74■□□□□ 0.27
TOP1P11387 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TOP1P11387 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TOP1P11387 CAP2P1-201ENST00000557743 1390 ntBASIC16.74■□□□□ 0.27
TOP1P11387 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TOP1P11387 AC020910.6-201ENST00000623084 1459 ntBASIC16.73■□□□□ 0.27
TOP1P11387 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TOP1P11387 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 OR8T1P-201ENST00000421347 918 ntBASIC16.73■□□□□ 0.27
TOP1P11387 RPL8P2-201ENST00000430538 502 ntBASIC16.73■□□□□ 0.27
TOP1P11387 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.73■□□□□ 0.27
TOP1P11387 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 AL512310.5-201ENST00000551999 515 ntBASIC16.73■□□□□ 0.27
TOP1P11387 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TOP1P11387 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.73■□□□□ 0.27
TOP1P11387 AC079328.1-201ENST00000560358 952 ntBASIC16.73■□□□□ 0.27
TOP1P11387 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 AC007718.1-201ENST00000621078 280 ntBASIC16.73■□□□□ 0.27
TOP1P11387 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms