Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBB4AP04350 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBB4AP04350 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TUBB4AP04350 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBB4AP04350 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TUBB4AP04350 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 AL590824.1-201ENST00000403828 1349 ntBASIC15.29■□□□□ 0.04
TUBB4AP04350 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TUBB4AP04350 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBB4AP04350 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.29■□□□□ 0.04
TUBB4AP04350 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBB4AP04350 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TUBB4AP04350 AL512310.5-201ENST00000551999 515 ntBASIC15.29■□□□□ 0.04
TUBB4AP04350 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 AC004449.1-201ENST00000564240 433 ntBASIC15.29■□□□□ 0.04
TUBB4AP04350 AL844908.2-201ENST00000609461 460 ntBASIC15.29■□□□□ 0.04
TUBB4AP04350 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBB4AP04350 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TUBB4AP04350 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBB4AP04350 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 AC020910.5-201ENST00000623668 1865 ntBASIC15.29■□□□□ 0.04
TUBB4AP04350 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBB4AP04350 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 AC007952.5-201ENST00000572818 1486 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 INTS4P2-202ENST00000614726 2019 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 CLUHP2-201ENST00000426660 1303 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 AC134915.1-201ENST00000426461 574 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 AC068587.3-201ENST00000526613 355 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.28■□□□□ 0.04
TUBB4AP04350 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBB4AP04350 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.28■□□□□ 0.04
TUBB4AP04350 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 AC025678.2-201ENST00000562061 970 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 DDX12P-201ENST00000432996 2947 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 MARK2P16-201ENST00000605714 1723 ntBASIC15.28■□□□□ 0.04
TUBB4AP04350 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBB4AP04350 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBB4AP04350 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBB4AP04350 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TUBB4AP04350 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms