Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.55□□□□□ -0.4
KIAA1549Q9HCM3 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 RPL13AP19-201ENST00000434320 584 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC018463.1-201ENST00000456674 917 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 LINC00634-202ENST00000505157 222 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 GOLGA2P8-201ENST00000505201 779 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC005722.1-201ENST00000431878 964 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 LYPLA2P1-203ENST00000447689 696 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 AL132780.4-201ENST00000624870 1135 ntBASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KIAA1549Q9HCM3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 AC007952.5-201ENST00000572818 1486 ntBASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 AL592076.1-201ENST00000424448 303 ntBASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 AL356740.1-201ENST00000602192 1297 ntBASIC12.53□□□□□ -0.4
KIAA1549Q9HCM3 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms