Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC041040.1-201ENST00000425197 460 ntBASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 SERBP1P2-201ENST00000436888 1164 ntBASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 FAM187B2P-201ENST00000577135 713 ntBASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 MIR4746-201ENST00000579802 71 ntBASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AL139424.3-202ENST00000641619 917 ntBASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CRAMP1Q96RY5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.08■□□□□ 0.33
CRAMP1Q96RY5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.08■□□□□ 0.32
CRAMP1Q96RY5 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 DBET-201ENST00000630918 3363 ntBASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 AC133141.1-201ENST00000443015 339 ntBASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 AC027612.2-202ENST00000445955 1199 ntBASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 MIR2278-201ENST00000516344 96 ntBASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.07■□□□□ 0.32
CRAMP1Q96RY5 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms