Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRPFP62306 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRPFP62306 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SNRPFP62306 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 AC015909.5-201ENST00000624336 2266 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 AC073869.2-201ENST00000417338 1026 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 PDIA3P2-201ENST00000428073 158 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 AC073150.1-201ENST00000450406 1084 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 AC026803.1-201ENST00000569130 274 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 AL021707.6-201ENST00000609212 491 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.41■□□□□ 0.06
SNRPFP62306 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SNRPFP62306 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SNRPFP62306 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRPFP62306 LINC02486-201ENST00000604157 3000 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 AC009474.1-201ENST00000455096 1565 ntBASIC15.41■□□□□ 0.06
SNRPFP62306 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SNRPFP62306 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 NCLP1-201ENST00000445357 1963 ntBASIC15.4■□□□□ 0.06
SNRPFP62306 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 ABCD1P2-201ENST00000429313 1601 ntBASIC15.4■□□□□ 0.06
SNRPFP62306 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SNRPFP62306 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.4■□□□□ 0.06
SNRPFP62306 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SNRPFP62306 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 DUTP3-201ENST00000450025 415 ntBASIC15.4■□□□□ 0.06
SNRPFP62306 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.4■□□□□ 0.06
SNRPFP62306 AC012618.1-201ENST00000461223 412 ntBASIC15.4■□□□□ 0.06
SNRPFP62306 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 GPR182-203ENST00000622922 591 ntBASIC15.4■□□□□ 0.06
SNRPFP62306 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.4■□□□□ 0.06
SNRPFP62306 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.4■□□□□ 0.06
SNRPFP62306 MARK2P16-201ENST00000605714 1723 ntBASIC15.4■□□□□ 0.06
SNRPFP62306 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.4■□□□□ 0.06
SNRPFP62306 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNRPFP62306 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.4■□□□□ 0.06
SNRPFP62306 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms