Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 AC005237.2-201ENST00000434368 219 ntBASIC12.81□□□□□ -0.36
VBP1P61758 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 KRT18P35-201ENST00000510488 1269 ntBASIC12.81□□□□□ -0.36
VBP1P61758 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.81□□□□□ -0.36
VBP1P61758 AL512361.1-201ENST00000554200 418 ntBASIC12.81□□□□□ -0.36
VBP1P61758 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.81□□□□□ -0.36
VBP1P61758 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
VBP1P61758 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.81□□□□□ -0.36
VBP1P61758 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
VBP1P61758 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 AL590440.2-201ENST00000641973 1595 ntBASIC12.81□□□□□ -0.36
VBP1P61758 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VBP1P61758 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
VBP1P61758 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
VBP1P61758 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VBP1P61758 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
VBP1P61758 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VBP1P61758 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.8□□□□□ -0.36
VBP1P61758 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.8□□□□□ -0.36
VBP1P61758 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.8□□□□□ -0.36
VBP1P61758 RPL37AP1-201ENST00000412502 279 ntBASIC12.8□□□□□ -0.36
VBP1P61758 KRT18P32-201ENST00000424695 1287 ntBASIC12.8□□□□□ -0.36
VBP1P61758 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
VBP1P61758 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.8□□□□□ -0.36
VBP1P61758 MIR4453-201ENST00000584019 89 ntBASIC12.8□□□□□ -0.36
VBP1P61758 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 AC104506.1-201ENST00000609247 429 ntBASIC12.8□□□□□ -0.36
VBP1P61758 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VBP1P61758 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms