Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC20.63■□□□□ 0.89
KDM5CP41229 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.63■□□□□ 0.89
KDM5CP41229 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 RPL18AP15-201ENST00000430258 517 ntBASIC20.63■□□□□ 0.89
KDM5CP41229 OR4C14P-201ENST00000440929 923 ntBASIC20.63■□□□□ 0.89
KDM5CP41229 CETN3-205ENST00000522842 664 ntTSL 2 BASIC20.63■□□□□ 0.89
KDM5CP41229 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC20.63■□□□□ 0.89
KDM5CP41229 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC20.63■□□□□ 0.89
KDM5CP41229 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC20.63■□□□□ 0.89
KDM5CP41229 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KDM5CP41229 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
KDM5CP41229 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
KDM5CP41229 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 KRT8P25-201ENST00000473150 1456 ntBASIC20.62■□□□□ 0.89
KDM5CP41229 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
KDM5CP41229 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KDM5CP41229 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KDM5CP41229 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC20.62■□□□□ 0.89
KDM5CP41229 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC20.62■□□□□ 0.89
KDM5CP41229 RN7SL672P-201ENST00000474091 317 ntBASIC20.62■□□□□ 0.89
KDM5CP41229 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC20.62■□□□□ 0.89
KDM5CP41229 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC20.62■□□□□ 0.89
KDM5CP41229 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 SNORA50D-202ENST00000627561 132 ntBASIC20.62■□□□□ 0.89
KDM5CP41229 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
KDM5CP41229 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
KDM5CP41229 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KDM5CP41229 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
KDM5CP41229 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.61■□□□□ 0.89
KDM5CP41229 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 AC093462.1-201ENST00000621167 1683 ntBASIC20.61■□□□□ 0.89
KDM5CP41229 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KDM5CP41229 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC20.61■□□□□ 0.89
KDM5CP41229 SDCBP2P1-201ENST00000416115 614 ntBASIC20.61■□□□□ 0.89
KDM5CP41229 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC20.61■□□□□ 0.89
KDM5CP41229 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC20.61■□□□□ 0.89
KDM5CP41229 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KDM5CP41229 IGHVII-74-1-201ENST00000517572 241 ntBASIC20.61■□□□□ 0.89
KDM5CP41229 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KDM5CP41229 AC008622.3-201ENST00000621170 600 ntBASIC20.61■□□□□ 0.89
KDM5CP41229 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 AC005912.2-201ENST00000619492 2400 ntBASIC20.61■□□□□ 0.89
KDM5CP41229 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KDM5CP41229 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
KDM5CP41229 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC20.61■□□□□ 0.89
KDM5CP41229 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC20.61■□□□□ 0.89
KDM5CP41229 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KDM5CP41229 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC20.6■□□□□ 0.89
KDM5CP41229 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 TUBB4AP1-201ENST00000450755 1325 ntBASIC20.6■□□□□ 0.89
KDM5CP41229 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC20.6■□□□□ 0.89
KDM5CP41229 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 AC007191.1-201ENST00000623179 2995 ntBASIC20.6■□□□□ 0.89
KDM5CP41229 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KDM5CP41229 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC20.6■□□□□ 0.89
KDM5CP41229 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC20.6■□□□□ 0.89
KDM5CP41229 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC20.6■□□□□ 0.89
KDM5CP41229 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms