Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
THBS1P07996 AL391647.1-201ENST00000395664 511 ntBASIC13.18□□□□□ -0.3
THBS1P07996 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.18□□□□□ -0.3
THBS1P07996 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 XBP1P1-201ENST00000436573 652 ntBASIC13.18□□□□□ -0.3
THBS1P07996 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.18□□□□□ -0.3
THBS1P07996 AC108725.1-201ENST00000495472 409 ntBASIC13.18□□□□□ -0.3
THBS1P07996 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.18□□□□□ -0.3
THBS1P07996 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 AC005324.6-201ENST00000587972 613 ntBASIC13.18□□□□□ -0.3
THBS1P07996 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.18□□□□□ -0.3
THBS1P07996 LINC02486-201ENST00000604157 3000 ntBASIC13.18□□□□□ -0.3
THBS1P07996 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
THBS1P07996 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
THBS1P07996 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.18□□□□□ -0.3
THBS1P07996 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
THBS1P07996 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
THBS1P07996 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
THBS1P07996 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.17□□□□□ -0.3
THBS1P07996 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
THBS1P07996 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.17□□□□□ -0.3
THBS1P07996 RCC2P1-201ENST00000452257 1476 ntBASIC13.17□□□□□ -0.3
THBS1P07996 AC061965.1-201ENST00000560524 1465 ntBASIC13.17□□□□□ -0.3
THBS1P07996 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 AC018629.1-201ENST00000623381 1736 ntBASIC13.17□□□□□ -0.3
THBS1P07996 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
THBS1P07996 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.17□□□□□ -0.3
THBS1P07996 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.17□□□□□ -0.3
THBS1P07996 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 MTX1P1-201ENST00000440904 838 ntBASIC13.17□□□□□ -0.3
THBS1P07996 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.17□□□□□ -0.3
THBS1P07996 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.17□□□□□ -0.3
THBS1P07996 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC13.17□□□□□ -0.3
THBS1P07996 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC13.17□□□□□ -0.3
THBS1P07996 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.17□□□□□ -0.3
THBS1P07996 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.17□□□□□ -0.3
THBS1P07996 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
THBS1P07996 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
THBS1P07996 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
THBS1P07996 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 KRT8P29-201ENST00000420409 1371 ntBASIC13.17□□□□□ -0.3
THBS1P07996 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.17□□□□□ -0.3
THBS1P07996 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.17□□□□□ -0.3
THBS1P07996 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
THBS1P07996 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms