Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 AL731571.1-201ENST00000617058 5428 ntBASIC12.02□□□□□ -0.49
CD74P04233 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 BX324167.2-201ENST00000623717 3316 ntBASIC12.02□□□□□ -0.49
CD74P04233 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.02□□□□□ -0.49
CD74P04233 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CD74P04233 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CD74P04233 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CD74P04233 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 AC022364.1-202ENST00000617468 2409 ntBASIC12.01□□□□□ -0.49
CD74P04233 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 AC022144.1-201ENST00000602255 1580 ntBASIC12.01□□□□□ -0.49
CD74P04233 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.01□□□□□ -0.49
CD74P04233 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.01□□□□□ -0.49
CD74P04233 TSEN15P1-201ENST00000423257 515 ntBASIC12.01□□□□□ -0.49
CD74P04233 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.01□□□□□ -0.49
CD74P04233 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.01□□□□□ -0.49
CD74P04233 AC092552.1-201ENST00000547243 906 ntBASIC12.01□□□□□ -0.49
CD74P04233 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 AP001063.1-201ENST00000568332 529 ntBASIC12.01□□□□□ -0.49
CD74P04233 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.01□□□□□ -0.49
CD74P04233 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 AL691403.2-201ENST00000618460 490 ntBASIC12.01□□□□□ -0.49
CD74P04233 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CD74P04233 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.01□□□□□ -0.49
CD74P04233 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CD74P04233 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.01□□□□□ -0.49
CD74P04233 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CD74P04233 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12□□□□□ -0.49
CD74P04233 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12□□□□□ -0.49
CD74P04233 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12□□□□□ -0.49
CD74P04233 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CD74P04233 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12□□□□□ -0.49
CD74P04233 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms