Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 COL6A4P2-202ENST00000504443 2753 ntBASIC13.57□□□□□ -0.24
TM9SF4Q92544 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TM9SF4Q92544 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
TM9SF4Q92544 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC026316.1-201ENST00000398900 414 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 RN7SL258P-201ENST00000478664 300 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC116345.2-201ENST00000512837 523 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SCARNA21-201ENST00000517026 139 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 MIR4754-201ENST00000582477 89 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC103691.2-201ENST00000618824 433 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TCAF1P1-201ENST00000414990 2232 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 AC016397.2-201ENST00000624848 1985 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 FAM90A7P-201ENST00000382628 1395 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 FAM90A23P-201ENST00000400136 1395 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.56□□□□□ -0.24
TM9SF4Q92544 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TM9SF4Q92544 TBC1D3J-201ENST00000620719 1426 ntBASIC13.56□□□□□ -0.24
TM9SF4Q92544 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 KRT8P21-201ENST00000430398 1491 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms