Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 KRT8P18-201ENST00000413425 1445 ntBASIC13.39□□□□□ -0.27
ARHGEF39Q8N4T4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC098934.1-203ENST00000442868 1262 ntBASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 ORAOV1P1-201ENST00000503108 395 ntBASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 KLF17P1-201ENST00000547105 1126 ntBASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC084781.1-201ENST00000613737 656 ntBASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 AC067750.1-201ENST00000608826 6545 ntBASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ARHGEF39Q8N4T4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 SNX18-202ENST00000343017 3140 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms