Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.07■□□□□ 0.32
RFX7Q2KHR2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 HLA-DMA-203ENST00000395305 777 ntBASIC17.06■□□□□ 0.32
RFX7Q2KHR2 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 RPL18AP8-201ENST00000486071 528 ntBASIC17.06■□□□□ 0.32
RFX7Q2KHR2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 AC007952.4-201ENST00000573866 637 ntBASIC17.06■□□□□ 0.32
RFX7Q2KHR2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 CR392039.2-201ENST00000623182 509 ntBASIC17.06■□□□□ 0.32
RFX7Q2KHR2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX7Q2KHR2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 NUDT4P2-201ENST00000578341 546 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 AL161773.1-201ENST00000624845 863 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 AC072061.1-201ENST00000569710 2234 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 AC090502.4-201ENST00000551714 1386 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 AC117489.1-201ENST00000625169 3217 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 KRT8P43-201ENST00000406052 1458 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 NCLP1-201ENST00000445357 1963 ntBASIC17.05■□□□□ 0.32
RFX7Q2KHR2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX7Q2KHR2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AL357563.1-201ENST00000404728 395 ntBASIC17.04■□□□□ 0.32
RFX7Q2KHR2 SNORA50C-201ENST00000408535 133 ntBASIC17.04■□□□□ 0.32
RFX7Q2KHR2 LINC00265-2P-201ENST00000413372 782 ntBASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 RPL13AP19-201ENST00000434320 584 ntBASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX7Q2KHR2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms