Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 RNA5SP417-201ENST00000516459 108 ntBASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 KLF17P1-201ENST00000547105 1126 ntBASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC145285.5-201ENST00000562217 361 ntBASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 AC007250.1-201ENST00000608934 338 ntBASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DENND2AQ9ULE3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SLC25A15P3-201ENST00000505530 290 ntBASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 MIR6858-201ENST00000620733 67 ntBASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DENND2AQ9ULE3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 AC020910.6-201ENST00000623084 1459 ntBASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 FAM45BP-202ENST00000592932 1624 ntBASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DENND2AQ9ULE3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms