Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BTG3P1-201ENST00000435859 716 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 RPL18AP3-201ENST00000462885 528 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AC138701.2-201ENST00000553634 226 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 AC005357.2-202ENST00000590507 1060 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AL118556.2-201ENST00000614375 824 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 LINC00115-201ENST00000473798 1317 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AP001267.2-201ENST00000532619 2086 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC232323.1-201ENST00000540724 2099 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC090505.1-201ENST00000430515 1834 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC067931.2-201ENST00000623655 2003 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 HLA-DMA-203ENST00000395305 777 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AL512306.1-201ENST00000432698 848 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 AL591122.2-201ENST00000624125 1853 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 MYO15B-237ENST00000642007 4893 ntBASIC15.18■□□□□ 0.02
VARS2Q5ST30 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.18■□□□□ 0.02
VARS2Q5ST30 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VARS2Q5ST30 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 TEKT4P2-202ENST00000559466 1312 ntBASIC15.17■□□□□ 0.02
VARS2Q5ST30 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VARS2Q5ST30 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.17■□□□□ 0.02
VARS2Q5ST30 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms