Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.83□□□□□ -0.2
PCDH1Q08174 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PCDH1Q08174 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDH1Q08174 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDH1Q08174 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.83□□□□□ -0.2
PCDH1Q08174 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDH1Q08174 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PCDH1Q08174 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PCDH1Q08174 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PCDH1Q08174 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.83□□□□□ -0.2
PCDH1Q08174 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.83□□□□□ -0.2
PCDH1Q08174 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PCDH1Q08174 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.83□□□□□ -0.2
PCDH1Q08174 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 AGAP10P-201ENST00000454844 2418 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 AC004899.1-201ENST00000424687 1714 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 AC018629.1-201ENST00000623381 1736 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 HMGA1P1-201ENST00000415560 1062 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.82□□□□□ -0.2
PCDH1Q08174 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.82□□□□□ -0.2
PCDH1Q08174 SNORD3B-2-202ENST00000571722 791 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.82□□□□□ -0.2
PCDH1Q08174 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 CICP20-201ENST00000443330 2801 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 AP002353.1-201ENST00000528257 1599 ntBASIC13.82□□□□□ -0.2
PCDH1Q08174 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PCDH1Q08174 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.82□□□□□ -0.2
PCDH1Q08174 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PCDH1Q08174 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 DPM3-202ENST00000368399 517 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDH1Q08174 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PCDH1Q08174 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.81□□□□□ -0.2
PCDH1Q08174 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.81□□□□□ -0.2
PCDH1Q08174 BNIP3P42-201ENST00000454982 569 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 RPL13AP20-201ENST00000459725 609 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 FAM8A2P-201ENST00000528813 1142 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDH1Q08174 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.81□□□□□ -0.2
PCDH1Q08174 RN7SL163P-201ENST00000583100 276 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 BNIP3P29-201ENST00000598302 571 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 AL132994.2-201ENST00000603120 687 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 AC011447.5-201ENST00000616168 564 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 MIR6752-201ENST00000618442 71 ntBASIC13.81□□□□□ -0.2
PCDH1Q08174 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.81□□□□□ -0.2
PCDH1Q08174 AC004923.1-202ENST00000642106 209 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms