Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RIPPLY3P57055 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
RIPPLY3P57055 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 BNIP3P1-202ENST00000550043 1585 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 E2F3P2-201ENST00000447755 1422 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 RPL4P6-201ENST00000438116 1304 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC010141.1-201ENST00000411585 623 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC093106.1-201ENST00000437271 352 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC007952.4-201ENST00000573866 637 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 MIR4683-201ENST00000579659 81 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC006116.2-201ENST00000589958 988 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 AL450472.2-201ENST00000603663 1156 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RIPPLY3P57055 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 AC009090.5-201ENST00000624886 2285 ntBASIC11.97□□□□□ -0.49
RIPPLY3P57055 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.97□□□□□ -0.49
RIPPLY3P57055 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.96□□□□□ -0.49
RIPPLY3P57055 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RIPPLY3P57055 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms