Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
COL8A2P25067 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.1□□□□□ -0.47
COL8A2P25067 AC093752.3-201ENST00000567343 901 ntBASIC12.1□□□□□ -0.47
COL8A2P25067 MIR4706-201ENST00000582134 82 ntBASIC12.1□□□□□ -0.47
COL8A2P25067 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 AC103810.10-201ENST00000606504 343 ntBASIC12.1□□□□□ -0.47
COL8A2P25067 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.1□□□□□ -0.47
COL8A2P25067 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.1□□□□□ -0.47
COL8A2P25067 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
COL8A2P25067 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
COL8A2P25067 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.1□□□□□ -0.47
COL8A2P25067 RN7SL832P-201ENST00000607781 1756 ntBASIC12.1□□□□□ -0.47
COL8A2P25067 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.1□□□□□ -0.47
COL8A2P25067 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
COL8A2P25067 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 MIR33B-201ENST00000385104 96 ntBASIC12.09□□□□□ -0.47
COL8A2P25067 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 DUTP3-201ENST00000450025 415 ntBASIC12.09□□□□□ -0.47
COL8A2P25067 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 ALG1L13P-202ENST00000519320 584 ntBASIC12.09□□□□□ -0.47
COL8A2P25067 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.09□□□□□ -0.47
COL8A2P25067 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.09□□□□□ -0.47
COL8A2P25067 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.09□□□□□ -0.47
COL8A2P25067 AC051619.9-201ENST00000623237 597 ntBASIC12.09□□□□□ -0.47
COL8A2P25067 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
COL8A2P25067 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 AC064801.2-201ENST00000625052 1303 ntBASIC12.09□□□□□ -0.47
COL8A2P25067 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
COL8A2P25067 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
COL8A2P25067 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.09□□□□□ -0.47
COL8A2P25067 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms