Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RAB3BP20337 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 KRT8P28-201ENST00000433288 1390 ntBASIC12.6□□□□□ -0.39
RAB3BP20337 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RAB3BP20337 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
RAB3BP20337 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.6□□□□□ -0.39
RAB3BP20337 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB3BP20337 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.6□□□□□ -0.39
RAB3BP20337 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB3BP20337 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB3BP20337 TPRX2P-201ENST00000535362 881 ntBASIC12.6□□□□□ -0.39
RAB3BP20337 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 AC009407.1-201ENST00000568958 598 ntBASIC12.6□□□□□ -0.39
RAB3BP20337 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
RAB3BP20337 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RAB3BP20337 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB3BP20337 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
RAB3BP20337 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RAB3BP20337 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB3BP20337 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB3BP20337 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB3BP20337 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB3BP20337 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB3BP20337 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RAB3BP20337 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
RAB3BP20337 GNAQP1-201ENST00000444815 1067 ntBASIC12.59□□□□□ -0.39
RAB3BP20337 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
RAB3BP20337 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB3BP20337 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB3BP20337 MESTP3-201ENST00000503460 968 ntBASIC12.59□□□□□ -0.39
RAB3BP20337 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
RAB3BP20337 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.59□□□□□ -0.39
RAB3BP20337 RRP7BP-205ENST00000566851 833 ntBASIC12.59□□□□□ -0.39
RAB3BP20337 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.59□□□□□ -0.39
RAB3BP20337 AC010327.4-202ENST00000591484 748 ntBASIC12.59□□□□□ -0.39
RAB3BP20337 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 AC027612.4-201ENST00000605371 583 ntBASIC12.59□□□□□ -0.39
RAB3BP20337 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB3BP20337 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB3BP20337 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB3BP20337 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms