Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.07□□□□□ -0.32
P04436 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.07□□□□□ -0.32
P04436 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.07□□□□□ -0.32
P04436 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.07□□□□□ -0.32
P04436 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.07□□□□□ -0.32
P04436 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
P04436 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.07□□□□□ -0.32
P04436 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.07□□□□□ -0.32
P04436 AC103810.10-201ENST00000606504 343 ntBASIC13.07□□□□□ -0.32
P04436 AC007718.1-201ENST00000621078 280 ntBASIC13.07□□□□□ -0.32
P04436 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.07□□□□□ -0.32
P04436 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.07□□□□□ -0.32
P04436 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
P04436 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.07□□□□□ -0.32
P04436 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.07□□□□□ -0.32
P04436 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.07□□□□□ -0.32
P04436 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.07□□□□□ -0.32
P04436 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.07□□□□□ -0.32
P04436 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
P04436 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.07□□□□□ -0.32
P04436 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.07□□□□□ -0.32
P04436 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
P04436 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P04436 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P04436 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04436 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04436 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P04436 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.06□□□□□ -0.32
P04436 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 AC006987.1-201ENST00000413610 527 ntBASIC13.06□□□□□ -0.32
P04436 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.06□□□□□ -0.32
P04436 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 PRKXP1-201ENST00000561423 1122 ntBASIC13.06□□□□□ -0.32
P04436 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.06□□□□□ -0.32
P04436 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.06□□□□□ -0.32
P04436 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.06□□□□□ -0.32
P04436 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P04436 AC051619.9-201ENST00000623237 597 ntBASIC13.06□□□□□ -0.32
P04436 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
P04436 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P04436 AL590824.1-201ENST00000403828 1349 ntBASIC13.06□□□□□ -0.32
P04436 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
P04436 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.06□□□□□ -0.32
P04436 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P04436 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.05□□□□□ -0.32
P04436 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms