Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 MIR193BHG-211ENST00000641433 5365 ntBASIC12.49□□□□□ -0.41
UBA52P62987 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.49□□□□□ -0.41
UBA52P62987 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 AL121723.1-201ENST00000445194 1519 ntBASIC12.49□□□□□ -0.41
UBA52P62987 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 ACKR1-201ENST00000368121 1240 ntBASIC12.49□□□□□ -0.41
UBA52P62987 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.49□□□□□ -0.41
UBA52P62987 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
UBA52P62987 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.49□□□□□ -0.41
UBA52P62987 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.49□□□□□ -0.41
UBA52P62987 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.49□□□□□ -0.41
UBA52P62987 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UBA52P62987 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
UBA52P62987 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
UBA52P62987 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
UBA52P62987 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
UBA52P62987 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 AC006033.1-201ENST00000440505 426 ntBASIC12.48□□□□□ -0.41
UBA52P62987 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 KRT8P13-201ENST00000463294 1010 ntBASIC12.48□□□□□ -0.41
UBA52P62987 AC026410.3-201ENST00000514280 936 ntBASIC12.48□□□□□ -0.41
UBA52P62987 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.48□□□□□ -0.41
UBA52P62987 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 GNRHR2-203ENST00000581100 1187 ntBASIC12.48□□□□□ -0.41
UBA52P62987 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.48□□□□□ -0.41
UBA52P62987 AC093813.1-201ENST00000605066 256 ntBASIC12.48□□□□□ -0.41
UBA52P62987 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
UBA52P62987 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBA52P62987 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.48□□□□□ -0.41
UBA52P62987 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms