Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRPFP62306 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRPFP62306 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRPFP62306 AL353637.1-201ENST00000451571 732 ntBASIC15.47■□□□□ 0.07
SNRPFP62306 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRPFP62306 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRPFP62306 HIST2H2BC-201ENST00000498492 580 ntBASIC15.47■□□□□ 0.07
SNRPFP62306 AC114947.1-202ENST00000514136 344 ntBASIC15.47■□□□□ 0.07
SNRPFP62306 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.47■□□□□ 0.07
SNRPFP62306 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 MEG3_2.1-201ENST00000611456 105 ntBASIC15.47■□□□□ 0.07
SNRPFP62306 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.47■□□□□ 0.07
SNRPFP62306 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SNRPFP62306 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 AC111170.3-201ENST00000624282 2464 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 AC004554.1-201ENST00000422830 1468 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 PPP1R2P4-201ENST00000424051 595 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 AC099548.2-209ENST00000480264 625 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.46■□□□□ 0.07
SNRPFP62306 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 MIR6787-201ENST00000616675 61 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 AC079336.7-201ENST00000623428 1078 ntBASIC15.46■□□□□ 0.07
SNRPFP62306 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SNRPFP62306 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.46■□□□□ 0.07
SNRPFP62306 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SNRPFP62306 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNRPFP62306 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SNRPFP62306 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
SNRPFP62306 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNRPFP62306 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
SNRPFP62306 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNRPFP62306 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SNRPFP62306 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNRPFP62306 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.46■□□□□ 0.06
SNRPFP62306 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SNRPFP62306 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNRPFP62306 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SNRPFP62306 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNRPFP62306 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.45■□□□□ 0.06
SNRPFP62306 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SNRPFP62306 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.45■□□□□ 0.06
SNRPFP62306 KRT8P31-201ENST00000504812 1408 ntBASIC15.45■□□□□ 0.06
SNRPFP62306 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.45■□□□□ 0.06
SNRPFP62306 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SNRPFP62306 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms