Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CENPAP49450 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CENPAP49450 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CENPAP49450 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.12□□□□□ -0.31
CENPAP49450 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
CENPAP49450 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CENPAP49450 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CENPAP49450 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.12□□□□□ -0.31
CENPAP49450 AC011495.1-201ENST00000498085 584 ntBASIC13.12□□□□□ -0.31
CENPAP49450 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.12□□□□□ -0.31
CENPAP49450 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CENPAP49450 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.12□□□□□ -0.31
CENPAP49450 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.12□□□□□ -0.31
CENPAP49450 MIR5189-201ENST00000577370 114 ntBASIC13.12□□□□□ -0.31
CENPAP49450 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 DGCR9-201ENST00000609630 2415 ntBASIC13.12□□□□□ -0.31
CENPAP49450 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CENPAP49450 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.12□□□□□ -0.31
CENPAP49450 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CENPAP49450 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.12□□□□□ -0.31
CENPAP49450 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.11□□□□□ -0.31
CENPAP49450 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.11□□□□□ -0.31
CENPAP49450 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CENPAP49450 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CENPAP49450 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 BX324167.2-201ENST00000623717 3316 ntBASIC13.11□□□□□ -0.31
CENPAP49450 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.11□□□□□ -0.31
CENPAP49450 POM121L8P-201ENST00000417732 1281 ntBASIC13.11□□□□□ -0.31
CENPAP49450 C2orf27AP3-201ENST00000434123 579 ntBASIC13.11□□□□□ -0.31
CENPAP49450 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.11□□□□□ -0.31
CENPAP49450 POM121L9P-203ENST00000441984 1285 ntBASIC13.11□□□□□ -0.31
CENPAP49450 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 AC106760.1-201ENST00000508690 800 ntBASIC13.11□□□□□ -0.31
CENPAP49450 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.11□□□□□ -0.31
CENPAP49450 MIR497HG-202ENST00000572453 3838 ntBASIC13.11□□□□□ -0.31
CENPAP49450 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.11□□□□□ -0.31
CENPAP49450 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 AC027307.3-201ENST00000594262 1100 ntBASIC13.11□□□□□ -0.31
CENPAP49450 ECM1P1-201ENST00000604092 1279 ntBASIC13.11□□□□□ -0.31
CENPAP49450 AL354718.3-201ENST00000616414 581 ntBASIC13.11□□□□□ -0.31
CENPAP49450 CR382287.1-201ENST00000623954 586 ntBASIC13.11□□□□□ -0.31
CENPAP49450 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.11□□□□□ -0.31
CENPAP49450 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 CICP16-201ENST00000502609 2813 ntBASIC13.11□□□□□ -0.31
CENPAP49450 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.11□□□□□ -0.31
CENPAP49450 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.11□□□□□ -0.31
CENPAP49450 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CENPAP49450 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CENPAP49450 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CENPAP49450 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms