Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.12■□□□□ 0.33
POLR3DP05423 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
POLR3DP05423 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 SBF1P1-201ENST00000444527 5631 ntBASIC17.12■□□□□ 0.33
POLR3DP05423 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
POLR3DP05423 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.12■□□□□ 0.33
POLR3DP05423 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
POLR3DP05423 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.12■□□□□ 0.33
POLR3DP05423 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 TMEM198B-204ENST00000484016 896 ntBASIC17.12■□□□□ 0.33
POLR3DP05423 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.12■□□□□ 0.33
POLR3DP05423 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.12■□□□□ 0.33
POLR3DP05423 AC128714.1-201ENST00000637035 887 ntBASIC17.12■□□□□ 0.33
POLR3DP05423 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
POLR3DP05423 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR3DP05423 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC011498.7-201ENST00000624986 2027 ntBASIC17.11■□□□□ 0.33
POLR3DP05423 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 RPS9P1-201ENST00000419943 583 ntBASIC17.11■□□□□ 0.33
POLR3DP05423 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
POLR3DP05423 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.11■□□□□ 0.33
POLR3DP05423 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.11■□□□□ 0.33
POLR3DP05423 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR3DP05423 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR3DP05423 AC041040.2-201ENST00000622926 2899 ntBASIC17.11■□□□□ 0.33
POLR3DP05423 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3DP05423 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3DP05423 GRK6P1-201ENST00000400595 1711 ntBASIC17.1■□□□□ 0.33
POLR3DP05423 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3DP05423 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3DP05423 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
POLR3DP05423 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3DP05423 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR3DP05423 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms