Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.16□□□□□ -0.3
HIST1H2ABP04908 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AL358472.3-201ENST00000608147 415 ntBASIC13.16□□□□□ -0.3
HIST1H2ABP04908 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 SHC1P1-201ENST00000425230 1745 ntBASIC13.16□□□□□ -0.3
HIST1H2ABP04908 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HIST1H2ABP04908 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 MAPK10-262ENST00000641051 5738 ntBASIC13.15□□□□□ -0.3
HIST1H2ABP04908 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 BOLA2P3-201ENST00000404566 256 ntBASIC13.15□□□□□ -0.3
HIST1H2ABP04908 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 AL161932.2-201ENST00000435436 679 ntBASIC13.15□□□□□ -0.3
HIST1H2ABP04908 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 AP003171.2-201ENST00000528208 925 ntBASIC13.15□□□□□ -0.3
HIST1H2ABP04908 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 PPT1-213ENST00000641319 2388 ntBASIC13.15□□□□□ -0.3
HIST1H2ABP04908 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HIST1H2ABP04908 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H2ABP04908 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H2ABP04908 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H2ABP04908 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
HIST1H2ABP04908 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
HIST1H2ABP04908 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.14□□□□□ -0.31
HIST1H2ABP04908 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 CICP16-201ENST00000502609 2813 ntBASIC13.14□□□□□ -0.31
HIST1H2ABP04908 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H2ABP04908 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms