Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
POLR1DQ9Y2S0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
POLR1DQ9Y2S0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
POLR1DQ9Y2S0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1DQ9Y2S0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1DQ9Y2S0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
POLR1DQ9Y2S0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1DQ9Y2S0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1DQ9Y2S0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
POLR1DQ9Y2S0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1DQ9Y2S0 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.79
POLR1DQ9Y2S0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1DQ9Y2S0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 AC004448.1-201ENST00000458332 883 ntBASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1DQ9Y2S0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms