Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PCDHA6Q9UN73 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.95■■□□□ 1.75
PCDHA6Q9UN73 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.95■■□□□ 1.75
PCDHA6Q9UN73 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.95■■□□□ 1.75
PCDHA6Q9UN73 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA6Q9UN73 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA6Q9UN73 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA6Q9UN73 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA6Q9UN73 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA6Q9UN73 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.93■■□□□ 1.74
PCDHA6Q9UN73 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA6Q9UN73 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA6Q9UN73 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 AC009102.2-201ENST00000606772 1639 ntBASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PCDHA6Q9UN73 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PCDHA6Q9UN73 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
PCDHA6Q9UN73 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.91■■□□□ 1.74
PCDHA6Q9UN73 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA6Q9UN73 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA6Q9UN73 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHA6Q9UN73 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA6Q9UN73 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.89■■□□□ 1.74
PCDHA6Q9UN73 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.89■■□□□ 1.73
PCDHA6Q9UN73 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA6Q9UN73 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.89■■□□□ 1.73
PCDHA6Q9UN73 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PCDHA6Q9UN73 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA6Q9UN73 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 SRD5A1P1-201ENST00000442297 786 ntBASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.86■■□□□ 1.73
PCDHA6Q9UN73 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA6Q9UN73 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.85■■□□□ 1.73
PCDHA6Q9UN73 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA6Q9UN73 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA6Q9UN73 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA6Q9UN73 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.84■■□□□ 1.73
PCDHA6Q9UN73 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms