Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF304Q9HCX3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.39■■□□□ 1.02
ZNF304Q9HCX3 C17orf82-201ENST00000623772 1530 ntBASIC21.39■■□□□ 1.02
ZNF304Q9HCX3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF304Q9HCX3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 MIR638-201ENST00000385237 100 ntBASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 DUX4L19-201ENST00000557448 1267 ntBASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF304Q9HCX3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.38■■□□□ 1.01
ZNF304Q9HCX3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 AC019069.1-201ENST00000610008 1333 ntBASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 PBX2P1-201ENST00000493219 1291 ntBASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 AC099791.2-201ENST00000605725 427 ntBASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZNF304Q9HCX3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 AL136162.1-201ENST00000607711 1078 ntBASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 AC241377.3-202ENST00000626088 1088 ntBASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 AC241585.3-202ENST00000628937 1088 ntBASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 AC245100.8-202ENST00000629247 1058 ntBASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZNF304Q9HCX3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 AC106739.1-201ENST00000617035 715 ntBASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 SYT6-210ENST00000641643 1587 ntBASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.35■■□□□ 1.01
ZNF304Q9HCX3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF304Q9HCX3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF304Q9HCX3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF304Q9HCX3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.34■■□□□ 1.01
ZNF304Q9HCX3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF304Q9HCX3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ZNF304Q9HCX3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 AC133561.4-201ENST00000566112 224 ntBASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.33■■□□□ 1.01
ZNF304Q9HCX3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF304Q9HCX3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1
ZNF304Q9HCX3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF304Q9HCX3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ZNF304Q9HCX3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF304Q9HCX3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ZNF304Q9HCX3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ZNF304Q9HCX3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZNF304Q9HCX3 AC135279.3-201ENST00000610945 1311 ntBASIC21.32■■□□□ 1
ZNF304Q9HCX3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.32■■□□□ 1
ZNF304Q9HCX3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.32■■□□□ 1
ZNF304Q9HCX3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ZNF304Q9HCX3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.32■■□□□ 1
ZNF304Q9HCX3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms