Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCNX3Q9H6A9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCNX3Q9H6A9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCNX3Q9H6A9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCNX3Q9H6A9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCNX3Q9H6A9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCNX3Q9H6A9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCNX3Q9H6A9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCNX3Q9H6A9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 C17orf82-201ENST00000623772 1530 ntBASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.57■□□□□ 0.88
PCNX3Q9H6A9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCNX3Q9H6A9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCNX3Q9H6A9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCNX3Q9H6A9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCNX3Q9H6A9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.53■□□□□ 0.88
PCNX3Q9H6A9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCNX3Q9H6A9 AC009102.2-201ENST00000606772 1639 ntBASIC20.53■□□□□ 0.88
PCNX3Q9H6A9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.53■□□□□ 0.88
PCNX3Q9H6A9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCNX3Q9H6A9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.52■□□□□ 0.88
PCNX3Q9H6A9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCNX3Q9H6A9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCNX3Q9H6A9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCNX3Q9H6A9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCNX3Q9H6A9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCNX3Q9H6A9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms