Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
GAFA1Q96PS6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GAFA1Q96PS6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 AC009102.2-201ENST00000606772 1639 ntBASIC18.8■□□□□ 0.6
GAFA1Q96PS6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GAFA1Q96PS6 ANOS2P-203ENST00000472227 1816 ntBASIC18.79■□□□□ 0.6
GAFA1Q96PS6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GAFA1Q96PS6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.78■□□□□ 0.6
GAFA1Q96PS6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.77■□□□□ 0.6
GAFA1Q96PS6 AC131212.1-201ENST00000613771 668 ntBASIC18.77■□□□□ 0.6
GAFA1Q96PS6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
GAFA1Q96PS6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GAFA1Q96PS6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.76■□□□□ 0.59
GAFA1Q96PS6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GAFA1Q96PS6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.76■□□□□ 0.59
GAFA1Q96PS6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.76■□□□□ 0.59
GAFA1Q96PS6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.76■□□□□ 0.59
GAFA1Q96PS6 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.76■□□□□ 0.59
GAFA1Q96PS6 AC079630.1-202ENST00000618127 1840 ntBASIC18.76■□□□□ 0.59
GAFA1Q96PS6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GAFA1Q96PS6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms