Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC141586.4-201ENST00000624558 1573 ntBASIC23.06■■□□□ 1.28
PAF1Q8N7H5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PAF1Q8N7H5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.06■■□□□ 1.28
PAF1Q8N7H5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.06■■□□□ 1.28
PAF1Q8N7H5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.06■■□□□ 1.28
PAF1Q8N7H5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PAF1Q8N7H5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PAF1Q8N7H5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 LINC00543-201ENST00000567234 1845 ntBASIC23.05■■□□□ 1.28
PAF1Q8N7H5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PAF1Q8N7H5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PAF1Q8N7H5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PAF1Q8N7H5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PAF1Q8N7H5 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.04■■□□□ 1.28
PAF1Q8N7H5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PAF1Q8N7H5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
PAF1Q8N7H5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PAF1Q8N7H5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.02■■□□□ 1.28
PAF1Q8N7H5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.02■■□□□ 1.28
PAF1Q8N7H5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PAF1Q8N7H5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.02■■□□□ 1.28
PAF1Q8N7H5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.02■■□□□ 1.28
PAF1Q8N7H5 AIRN-201ENST00000601203 4374 ntBASIC23.02■■□□□ 1.28
PAF1Q8N7H5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PAF1Q8N7H5 ALDH1A3-203ENST00000557963 1670 ntBASIC23.02■■□□□ 1.28
PAF1Q8N7H5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 AL117332.1-201ENST00000622628 974 ntBASIC23.01■■□□□ 1.27
PAF1Q8N7H5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PAF1Q8N7H5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23■■□□□ 1.27
PAF1Q8N7H5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23■■□□□ 1.27
PAF1Q8N7H5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23■■□□□ 1.27
PAF1Q8N7H5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PAF1Q8N7H5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PAF1Q8N7H5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PAF1Q8N7H5 AC008406.3-201ENST00000620001 1374 ntBASIC22.98■■□□□ 1.27
PAF1Q8N7H5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PAF1Q8N7H5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PAF1Q8N7H5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PAF1Q8N7H5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PAF1Q8N7H5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.97■■□□□ 1.27
PAF1Q8N7H5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms