Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.41■■□□□ 1.34
FOXR1Q6PIV2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
FOXR1Q6PIV2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
FOXR1Q6PIV2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
FOXR1Q6PIV2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.39■■□□□ 1.33
FOXR1Q6PIV2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
FOXR1Q6PIV2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.39■■□□□ 1.33
FOXR1Q6PIV2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
FOXR1Q6PIV2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
FOXR1Q6PIV2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 AC019069.1-201ENST00000610008 1333 ntBASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 AL121603.2-201ENST00000557373 2117 ntBASIC23.38■■□□□ 1.33
FOXR1Q6PIV2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXR1Q6PIV2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FOXR1Q6PIV2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
FOXR1Q6PIV2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 RNF165-205ENST00000588679 2904 ntBASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 AC239859.2-201ENST00000444165 318 ntBASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FOXR1Q6PIV2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 AL356441.2-201ENST00000443009 864 ntBASIC23.33■■□□□ 1.33
FOXR1Q6PIV2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
FOXR1Q6PIV2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
FOXR1Q6PIV2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
FOXR1Q6PIV2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
FOXR1Q6PIV2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.33■■□□□ 1.32
FOXR1Q6PIV2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 ECEL1P1-201ENST00000373592 1742 ntBASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXR1Q6PIV2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR1Q6PIV2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms