Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.85■□□□□ 0.77
APOC1P02654 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.85■□□□□ 0.77
APOC1P02654 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
APOC1P02654 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.85■□□□□ 0.77
APOC1P02654 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOC1P02654 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOC1P02654 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
APOC1P02654 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
APOC1P02654 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.84■□□□□ 0.77
APOC1P02654 AF131216.4-201ENST00000638924 1588 ntBASIC19.84■□□□□ 0.77
APOC1P02654 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.84■□□□□ 0.77
APOC1P02654 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.84■□□□□ 0.77
APOC1P02654 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
APOC1P02654 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
APOC1P02654 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.84■□□□□ 0.77
APOC1P02654 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOC1P02654 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
APOC1P02654 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
APOC1P02654 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
APOC1P02654 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.83■□□□□ 0.77
APOC1P02654 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
APOC1P02654 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOC1P02654 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
APOC1P02654 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
APOC1P02654 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
APOC1P02654 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOC1P02654 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APOC1P02654 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
APOC1P02654 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOC1P02654 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APOC1P02654 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.82■□□□□ 0.76
APOC1P02654 AC004448.1-201ENST00000458332 883 ntBASIC19.82■□□□□ 0.76
APOC1P02654 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
APOC1P02654 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APOC1P02654 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.82■□□□□ 0.76
APOC1P02654 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
APOC1P02654 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APOC1P02654 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.81■□□□□ 0.76
APOC1P02654 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOC1P02654 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOC1P02654 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.81■□□□□ 0.76
APOC1P02654 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
APOC1P02654 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.81■□□□□ 0.76
APOC1P02654 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.81■□□□□ 0.76
APOC1P02654 AC092068.2-201ENST00000590491 1708 ntBASIC19.81■□□□□ 0.76
APOC1P02654 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APOC1P02654 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.81■□□□□ 0.76
APOC1P02654 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOC1P02654 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.8■□□□□ 0.76
APOC1P02654 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APOC1P02654 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOC1P02654 ANOS2P-203ENST00000472227 1816 ntBASIC19.8■□□□□ 0.76
APOC1P02654 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APOC1P02654 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC1P02654 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC1P02654 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.79■□□□□ 0.76
APOC1P02654 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC1P02654 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC1P02654 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
APOC1P02654 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
APOC1P02654 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
APOC1P02654 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
APOC1P02654 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
APOC1P02654 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.78■□□□□ 0.76
APOC1P02654 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
APOC1P02654 PKD1P6-201ENST00000343738 4769 ntBASIC19.78■□□□□ 0.76
APOC1P02654 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOC1P02654 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.77■□□□□ 0.76
APOC1P02654 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
APOC1P02654 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
APOC1P02654 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.77■□□□□ 0.76
APOC1P02654 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.77■□□□□ 0.76
APOC1P02654 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.77■□□□□ 0.76
APOC1P02654 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
APOC1P02654 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.77■□□□□ 0.76
APOC1P02654 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.77■□□□□ 0.76
APOC1P02654 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
APOC1P02654 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
APOC1P02654 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
APOC1P02654 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
APOC1P02654 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.76■□□□□ 0.75
APOC1P02654 AC103834.1-201ENST00000520383 144 ntBASIC19.76■□□□□ 0.75
APOC1P02654 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
APOC1P02654 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms