Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV12-3P01733 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV12-3P01733 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV12-3P01733 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV12-3P01733 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV12-3P01733 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV12-3P01733 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV12-3P01733 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV12-3P01733 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRBV12-3P01733 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV12-3P01733 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV12-3P01733 MIR3621-201ENST00000580529 85 ntBASIC17.46■□□□□ 0.39
TRBV12-3P01733 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBV12-3P01733 AL356740.2-201ENST00000601559 647 ntBASIC17.46■□□□□ 0.39
TRBV12-3P01733 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV12-3P01733 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRBV12-3P01733 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV12-3P01733 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV12-3P01733 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.45■□□□□ 0.38
TRBV12-3P01733 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV12-3P01733 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV12-3P01733 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRBV12-3P01733 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TRBV12-3P01733 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.44■□□□□ 0.38
TRBV12-3P01733 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV12-3P01733 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV12-3P01733 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV12-3P01733 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV12-3P01733 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRBV12-3P01733 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV12-3P01733 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV12-3P01733 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV12-3P01733 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV12-3P01733 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV12-3P01733 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV12-3P01733 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRBV12-3P01733 AC009102.2-201ENST00000606772 1639 ntBASIC17.43■□□□□ 0.38
TRBV12-3P01733 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.42■□□□□ 0.38
TRBV12-3P01733 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRBV12-3P01733 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV12-3P01733 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV12-3P01733 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV12-3P01733 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRBV12-3P01733 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRBV12-3P01733 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV12-3P01733 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV12-3P01733 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms