Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL031848.2-201ENST00000607670 837 ntBASIC18.2■□□□□ 0.5
SRRM4A7MD48 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SRRM4A7MD48 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM4A7MD48 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM4A7MD48 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM4A7MD48 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SRRM4A7MD48 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM4A7MD48 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRRM4A7MD48 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM4A7MD48 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM4A7MD48 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.19■□□□□ 0.5
SRRM4A7MD48 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SRRM4A7MD48 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM4A7MD48 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.19■□□□□ 0.5
SRRM4A7MD48 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.18■□□□□ 0.5
SRRM4A7MD48 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM4A7MD48 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.18■□□□□ 0.5
SRRM4A7MD48 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 SNX5-217ENST00000606557 1087 ntBASIC18.18■□□□□ 0.5
SRRM4A7MD48 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SRRM4A7MD48 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM4A7MD48 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM4A7MD48 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM4A7MD48 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM4A7MD48 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM4A7MD48 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM4A7MD48 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM4A7MD48 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM4A7MD48 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRRM4A7MD48 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SRRM4A7MD48 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SRRM4A7MD48 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SRRM4A7MD48 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRRM4A7MD48 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SRRM4A7MD48 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRRM4A7MD48 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRRM4A7MD48 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRRM4A7MD48 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRRM4A7MD48 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.14■□□□□ 0.49
SRRM4A7MD48 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRRM4A7MD48 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRRM4A7MD48 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRRM4A7MD48 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRRM4A7MD48 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.14■□□□□ 0.49
SRRM4A7MD48 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.14■□□□□ 0.49
SRRM4A7MD48 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.14■□□□□ 0.49
SRRM4A7MD48 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.14■□□□□ 0.49
SRRM4A7MD48 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SRRM4A7MD48 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRRM4A7MD48 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRRM4A7MD48 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRRM4A7MD48 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.13■□□□□ 0.49
SRRM4A7MD48 AC079630.1-202ENST00000618127 1840 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms